BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003A04LP1|AL425052
(940 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1403 1443 0.0
>3x_Contig1403
Length = 7711
Score = 1443 bits (727), Expect = 0.0
Identities = 767/779 (98%), Gaps = 2/779 (0%)
Strand = Plus / Plus
Query: 164 aagcgatacgacagttctcgtgagtktaaacttcaccgacagttggcaacagttcaccgg 223
|||||||||||||| || || ||| |||||| |||||||||||||||||||||||||||
Sbjct: 11 aagcgatacgacaggtcgcgggagggtaaactgcaccgacagttggcaacagttcaccgg 70
Query: 224 tcaagacgttaatcaaagtggacttaccagcaccatttggaccaatgacagcaattcttg 283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 tcaagacgttaatcaaagtggacttaccagcaccatttggaccaatgacagcaattcttg 130
Query: 284 aggacaaagaacattggaaagaaatgtcagagatttgtggcttagcagtacctgggtatt 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 aggacaaagaacattggaaagaaatgtcagagatttgtggcttagcagtacctgggtatt 190
Query: 344 ggaaagtcatgttagaaaccttgacgatagccttttgcttggtcttaacaccttccaagt 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 ggaaagtcatgttagaaaccttgacgatagccttttgcttggtcttaacaccttccaagt 250
Query: 404 aacctggttctgggaatctgaattctaattcagaggcacccaattcgtagtaagacttag 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 aacctggttctgggaatctgaattctaattcagaggcacccaattcgtagtaagacttag 310
Query: 464 cagttgggcacttcttgacgaattcggacaagttacccttgtactttctcaacttcaaac 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 cagttgggcacttcttgacgaattcggacaagttacccttgtactttctcaacttcaaac 370
Query: 524 cttcgtaatggataatgtattgacagaccttgtccaagaaaccggagtcgtgggaaacaa 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 cttcgtaatggataatgtattgacagaccttgtccaagaaaccggagtcgtgggaaacaa 430
Query: 584 tgatggaagtgataccacaggtgttcaagtattcaaccaaccagttaacgttgacggtat 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tgatggaagtgataccacaggtgttcaagtattcaaccaaccagttaacgttgacggtat 490
Query: 644 ccaaatggttagttggttcatccaacaacaagatatcagcgttcttcaacacagctctag 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 ccaaatggttagttggttcatccaacaacaagatatcagcgttcttcaacacagctctag 550
Query: 704 ccaaagccaacttcatcttccaaccaccagatagggaagcaattggcatagcaatcattt 763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 ccaaagccaacttcatcttccaaccaccagatagggaagcaattggcatagcaatcattt 610
Query: 764 catcggagaaaccgaattctctcaacttgtcagtgataacatccttggtaccgacgttac 823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 catcggagaaaccgaattctctcaacttgtcagtgataacatccttggtaccgacgttac 670
Query: 824 cgctgaagacgaatcaaacaacggaggtgtcagcttgagta-catcgatatcgtgctcga 882
||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 671 cgctgaagacgaagtcaacaacggaggtgtcagcttgagtaccatcgatatcgtgctcga 730
Query: 883 cgtaaacggttctacattcttcttgagttggg-aamcgtcaacttgaccgttggcgata 940
|||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 731 cgtaaacggttctacattcttcttgagttgggaaaccgtcaacttgaccgttggcgata 789
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6536
Number of Sequences: 1807
Number of extensions: 6536
Number of successful extensions: 63
Number of sequences better than 1.0e-20: 1
length of query: 940
length of database: 10,358,551
effective HSP length: 16
effective length of query: 924
effective length of database: 10,329,639
effective search space: 9544586436
effective search space used: 9544586436
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)